WebJan 6, 2024 · Single-cell transcriptome has enabled the transcriptional profiling of thousands of immune cells in complex tissues and cancers. However, subtle transcriptomic differences in immune cell subpopulations and the high dimensionality of transcriptomic data make the clustering and annotation of immune ce … WebSep 22, 2024 · The resulting database, mobileOG-db (for mobile orthologous groups), comprises over 700,000 deduplicated sequences encompassing five major mobileOG categories and more than 50 minor categories, providing a structured language and interpretable basis for an array of MGE-centered analyses. mobileOG-db can be …
RefSeq curation and annotation of the human reference …
WebMay 12, 2024 · Provides a collection of reference expression datasets with curated cell type labels, for use in procedures like automated annotation of single-cell data or deconvolution of bulk RNA-seq. LTLA/celldex: Reference Index for Cell Types version 1.1.1 from GitHub WebUniProt Annotation GO Annotation Cell membrane; Single-pass type I membrane protein Curated Membrane raft; Single-pass type I membrane protein Curated Features Showing features for topological domain, transmembrane. Expand table Keywords Cellular component # Cell membrane # Membrane Disease & Variants Involvement in disease gpu temperaturen windows 11
scBERT: a Large-scale Pretrained Deep Langurage Model for Cell …
WebSep 7, 2024 · In addition, we have established a community-curated cell-type marker compendium, containing more than 6000 gene-cell-type associations, as a resource for … WebResources for automated cell type annotation (reference-based): There are tools developed by the community for automatically annotating cells by comparing new data with … Web87 performance on cell type annotation with a desirable precision. 88 89 Materials and methods 90 Marker genes identification 91 The input of SCSA is a DEGs clusters matrix, in a format that is supported by the ... 102 integrated 11,464 manually curated cell markers of 459 cell types in 158 human 103 tissues/sub-tissues and 7,855 cell markers ... gpu temperature check windows 10